Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928311.1_cds_XP_016475896.1_67784
CDS Infomation

[gene=LOC107797514] [db_xref=GeneID:107797514] [protein=1-aminocyclopropane-1-carboxylate oxidase homolog 1-like] [protein_id=XP_016475896.1] [location=complement(join(40912..41163,41267..41588,41939..42282,42415..42591))] [gbkey=CDS]
Sequence

ATGGTTGTAACATGTGAACATAGCTACGATAGGACTAGTGAATTAATAGCTTTTGATTGT
ACAAAAGCTGGTGTTAAAGGACTAGTTGATGCAAGAGTTGAAAAGGTTCCAAGAATTTTC
TATACACCAGAAGATGCATATATTGTGGCATCTAATGATCCTGAAAAATCCCAATTTAAT
ATTCCTGTTATAGACTTAGATGGCATCAGTAAAGATCCAATCAAACGTAGCGCGATAGTT
GAAAAAATCCGTGATGCATCTGAAGTGTGGGGTTTCTTTCAAGTGGTCAATCATGGAATT
CCAGAAAGTGTTTTGGAAGAAATGTTGAATGGTGATAGGAGGTTTTATGAGCAAGACACT
GAGGTGAAGAAACGATGGTATACACGTGACATCTCAAAAAAAGTGATGTATAATAGTAAT
TTTGATCTGTATAGAGGCGCATCGGCTAATTGGAGGGACACTACTAATTGTAGTATGGCT
CCAAATCCTCCTACTGCAGATGAATTGCCAGAGGCTTGCAGGGACATTTTGATTGAGTAC
TCGGAGCAAGTAAAGAAGTTGGGTCGTTCTTTATTTGAATTACTCTCTGAGGCGCTTGGC
CTCAACCCGAGCTATCTGAATGACATTGGGTGTTCAGAAGGGCTTGGTATTTTGTACCAT
TATTACCCGGCTTGCCCTGAGCCAGAACTAACTCTTGGAACTAGCAAGCATGAAGACTGT
GACTTCGTCACAGTACTGCTACAGGATCACATTGGAGGCCTTCAGGTTCTTCATAACAAT
TACTGGGTTGATGTTCCTCCTGTTTCTGGTGCTCTTGTAGTAAATGTTGGTGATCTTTTG
CAGCTCATATCAAATGACAAATTCACGAGCATTGCACACAGAGTTCTAGCAAGTTGTGTT
GGTCCAAGAGTATCAGTGGCCTGTTTTTTTACCACCGGTCACTCATTATCATCGAGAGTT
TATGGACCAATTAAGGAGTTGTTATCAGAAGATAATCCTGCGAGGTATTGGGAAACTACT
GTGAAGGATTACACAATTCACTATTATGCAACAGGAATTGGAGGCAAATCTGCCTTGTCG
GAGTTAAGGATCTGA

Peptide Sequence

PEP ID

XP_016475896.1
PEP Infomation

PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Nicotiana tabacum]
Sequence

MVVTCEHSYDRTSELIAFDCTKAGVKGLVDARVEKVPRIFYTPEDAYIVASNDPEKSQFN
IPVIDLDGISKDPIKRSAIVEKIRDASEVWGFFQVVNHGIPESVLEEMLNGDRRFYEQDT
EVKKRWYTRDISKKVMYNSNFDLYRGASANWRDTTNCSMAPNPPTADELPEACRDILIEY
SEQVKKLGRSLFELLSEALGLNPSYLNDIGCSEGLGILYHYYPACPEPELTLGTSKHEDC
DFVTVLLQDHIGGLQVLHNNYWVDVPPVSGALVVNVGDLLQLISNDKFTSIAHRVLASCV
GPRVSVACFFTTGHSLSSRVYGPIKELLSEDNPARYWETTVKDYTIHYYATGIGGKSALS
ELRI

Transcript Sequence

Gene sequence data has not been registered.